Question 1
2 marksDescribe how a phosphodiester bond is formed between two nucleotides.
Model answer
A condensation reaction occurs between the phosphate group of one nucleotide and the pentose (deoxyribose or ribose) of the other nucleotide, releasing a molecule of water.
Explanation
Like glycosidic and peptide bonds, the phosphodiester bond is formed by condensation and broken by hydrolysis. It links the sugar of one nucleotide to the phosphate of the next, so a chain of alternating sugars and phosphates (the sugar-phosphate backbone) is built up with the bases sticking out. A common error is to say the bond forms between bases - bases are joined only by hydrogen bonds, between the two strands of DNA.
Mark scheme
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1 mark
Condensation (reaction) / a molecule of water is released
Reject hydrolysis. Ignore the names of enzymes.
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1 mark
Between the phosphate (group) of one nucleotide and the pentose / deoxyribose / ribose / sugar of the other (nucleotide)
Accept 'joins the sugar of one nucleotide to the phosphate of the next'. Do not accept 'between the bases', 'between two phosphates' or any reference to hydrogen bonds forming.